Table 1.
Genotypes | D43 | D61 | D69 | D72 |
---|---|---|---|---|
Raw reads | 55,939,062 | 65,046,902 | 55,709,670 | 59,033,066 |
Clean reads | 55,454,800 | 64,631,336 | 55,341,366 | 58,596,198 |
Q30(%) | 90.04% | 90.98% | 90.94% | 90.45% |
GC content(%) | 47.00% | 47.00% | 47.00% | 47.00% |
Total mapped | 70.67% | 72.48% | 75.27% | 72.78% |
Uniquely mapped | 63.70% | 65.33% | 56.45% | 64.79% |
Multiple mapped | 6.97% | 7.14% | 18.82% | 7.99% |
Unmapped reads | 29.33% | 27.52% | 24.73% | 27.22% |
The number of detected genes in libraries | 53047 | 54081 | 54501 | 53386 |
Numbers in the last column represent the genes that were detected in each library by alignment to the current annotated B. napus genomes.