Table 2. miRNAs specifically overexpressed in triple negative breast tumors that are predicted to target the 3′UTR of BRCA1.
| miRNA | Start | Stop | Target-site | Agreement | Prediction algrithms | Agreement score |
|---|---|---|---|---|---|---|
| hsa-mir-187-5p | 1011 | 1032 | 7mer-m8 | 1 | Miranda | 1,264 |
| hsa-mir-498 | 168 | 189 | 7mer-m8 | 1 | Miranda | 1,236 |
| hsa-mir-146a-5p | 489 | 507 | 8mer | 3 | Miranda, Mirtarbase, OncomiRDB | 1,209 |
| hsa-mir-2113 | 198 | 220 | 8mer | 1 | Miranda | 1,199 |
| hsa-mir-4639-3p | 439 | 456 | 7mer-m8 | 1 | Miranda | 1,195 |
| hsa-mir-4503 | 167 | 188 | N/A | 1 | Miranda | 1,182 |
| hsa-mir-4653-3p | 972 | 997 | N/A | 1 | Miranda | 1,182 |
| hsa-mir-3976 | 293 | 319 | N/A | 1 | Miranda | 1,113 |
| hsa-mir-2113 | 332 | 354 | N/A | 1 | Miranda | 1,099 |
| hsa-mir-1285-5p | 829 | 847 | Offset 3-8 6mer | 1 | Miranda | 1,099 |
| hsa-mir-921 | 978 | 1003 | N/A | 1 | Miranda | 1,086 |
| hsa-mir-5000-3p | 89 | 110 | 7mer-m8 | 1 | Miranda | 1,072 |
| hsa-mir-5580-5p | 1 | 12 | 7mer-m8 | 1 | Miranda | 1,058 |
| hsa-mir-150-5p | 599 | 620 | 7mer-m8 | 1 | Miranda | 1,044 |
| hsa-mir-1197 | 924 | 944 | N/A | 1 | Miranda | 1,044 |
| hsa-mir-498 | 1058 | 1080 | N/A | 1 | Miranda | 1,044 |
| hsa-mir-146a-5p | 983 | 989 | 8mer | 3 | Pita, Mirtarbase, OncomiRDB | −0,868 |
| hsa-mir-3925-5p | 984 | 990 | 8mer | 1 | Pita | −0,868 |
| hsa-mir-548ao-3p | 982 | 988 | 8mer | 1 | Pita | −0,868 |