Table 1. Up-regulated genes from the WT under oxidative stressing conditions.
SCO no. | Name | Function | M-value | Fold-change |
---|---|---|---|---|
SCO6094 | ssuC | transport system integral membrane protein | 3.19 | 9.13 |
SCO6095 | ssuB | ABC transporter ATP-binding protein | 3.81 | 14.03 |
SCO6096 | ssuA | lipoprotein | 4.05 | 16.56 |
SCO6097 | cysN | sulfate adenylyltransferase subunit 1 | 3.91 | 15.03 |
SCO6098 | cysD | sulfate adenylyltransferase subunit 2 | 3.4 | 10.56 |
SCO6099 | cysC | adenylylsulfate kinase | 3.51 | 11.39 |
SCO6100 | cysH | phosphoadenosine phosphosulfate reductase | 4.09 | 17.03 |
SCO6101 | hypothetical protein | 4.21 | 18.51 | |
SCO6102 | cysI | nitrite/sulfite reductase | 3.22 | 9.32 |
SCO4164 | cysA | thiosulfate sulfurtransferase | 3.06 | 8.34 |
SCO4165 | hypothetical protein | 3.33 | 10.06 | |
SCO2910 | cysM | cysteine synthase | 3.08 | 8.46 |
SCO2911 | hypothetical protein | 2.39 | 5.24 | |
SCO2912 | hypothetical protein | 1.78 | 3.43 | |
SCO4498 | proton transport protein | 3.62 | 12.30 | |
SCO4499 | TetR family transcriptional regulator | 2.89 | 7.41 | |
SCO6266 | ScbA protein | 3.24 | 9.45 | |
SCO5772 | hypothetical protein | 3 | 8.00 | |
SCO4881 | polysaccharide biosynthesis-like protein | 2.83 | 7.11 | |
SCO3035 | hypothetical protein | 2.71 | 6.54 | |
SCO1557a | metQ | lipoprotein, methionine transporter | 1.18 | 2.26 |
SCO1558 | metI | ABC transporter permease | 1.81 | 3.51 |
SCO1559 | metN | ABC transporter ATP-binding protein | 2.39 | 5.24 |
SCO5958 | ATP-binding protein, conbalt transport | 1.66 | 3.19 | |
SCO6124 | hypothetical protein | 1.75 | 3.36 | |
SCO6045 | hypothetical protein | 1.59 | 3.01 | |
SCO1968 | hydrolase | 1.59 | 3.01 | |
SCO7549 | unknown | 1.51 | 2.85 | |
SCO5485 | small membrane protein | 1.51 | 2.85 | |
SCO1847a | cobD | cobalamin biosyntheis protein | 1.39 | 2.63 |
SCO1848a | cobQ | cobyric acid synthase | 1.42 | 2.67 |
SCO1849a | cobN | cobaltochelatase | 1.07 | 2.10 |
SCO1850a | chlD | chelatase | 0.96 | 1.943 |
SCO1851a | cobO | cob(I)alamin adenosyltransferase | 0.64 | 1.6 |
SCO1852a | cobI | precorrin-2 C20-methyltransferase | 0.87 | 1.83 |
SCO1553a | cysG | uroporphyrin-III C-methyltransferase | 1.20 | 2.30 |
SCO1554a | cobT | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | 1.14 | 2.20 |
SCO5227a | nrdX | redoxin | 1.45 | 2.73 |
SCO5226a | nrdA | ribonucleotide reductase large chain | 1.45 | 2.73 |
SCO5225a | nrdB | ribonucleotide reductase small chain | 1.30 | 2.46 |
SCO5224a | AraC-family transcriptional regulator | 1.16 | 2.23 | |
SCO7217a | ATP-binding protein, iron/heme/Cbl uptake | 1.10 | 2.15 |
aGenes with M-values < 1.5