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. 2016 Aug 19;11(8):e0159458. doi: 10.1371/journal.pone.0159458

Table 2. Eighteen candidate reference genes, PCR amplification primers, melting temperature (Tm), amplification efficiencies (E), and correlation coefficients (R2) examined in Moringa oleifera.

Genes Abbreviation E R2 Primer sequences (Forward/reverse) Tm (°C) Amplicon length(bp)
Glyceraldehyde-3-phosphate dehydrogenase GAPDH 1.019 0.999 AGCACAACAAGAAGGCGATAC/ CGATGGCAATGGACGGAATAT 84.34 190
Phosphoenolpyruvate carboxylase PEPC 0.974 0.998 AAGAACAAAAGGCACAGACCAAC/ GATCCCTACTTAAAGCAAAGACTC 86.41 297
Acyl carrier protein ACP1 0.952 1.000 AAACTTCTCCCACTGATGCG/ TCTTCGTGTTCTCCGTCCC 83.54 219
Acyl carrier protein ACP2 1.002 1.000 GAAACCAATGAGCACCCAGC/ GATGAATACCAGTCCACCGCAAC 80.80 87
Ubiquitin-conjugating enzyme UBCE 1.028 0.994 TCTATTGTTGTATGATGGGTAATGTG/ GGAAGGCGAGAACTGGAA 82.38 123
Ubiquitin extension protein UEP 1.042 0.999 AAAAACCGCATAAACAAAAAGAG/ GCCCTCCTCCAGTTCTACAAG 87.57 204
Malate dehydrogenase MDH1 0.913 0.999 GATAATACACTGCTGATCTCGG/ TAAACTTTGAGGGCATCGTC 82.75 131
Malate dehydrogenase MDH2 0.903 0.994 TAGAAACGCACTAATAAAGACAAAGG/ AGAGTGGACAATAGTTCAAGGGC 83.27 146
Actin ACT 0.939 0.994 TGGAAAGTGTCAAAGTGGGG/ CGATAATAACAACAGTAATGGCAGC 80.92 101
Elongation factor EF1 0.951 1.000 ATCTGGCTTCTCAACTTCTGTC/ CCTCTTCTCCCTAAAACCCTAG 83.61 157
Elongation factor EF2 0.950 0.995 CGAAGATGAAGAGGTGGGAG/ GCACTTGCCAAGCCTTTC 84.51 237
Alpha tubulin TUA1 0.977 1.000 CCCACATACACCAACCTCAAC/ ACATCAAGCAGCAAGCCAT 84.76 292
Alpha tubulin TUA2 0.963 0.996 AGACTCAGCACCCACCTCCTC/ TGTTCTCCCGCATTGACCAC 85.69 158
Beta-tubulin TUB 0.994 0.996 AGTGTAATGCCCCTTAGCC/ CCAAGTTCTGGGAAGTAGTCTGT 85.86 269
Cyclophilin CYP1 0.988 0.999 GAACTTGGAGCCGTAGATGG/ CCCGTTGGGCGTGTCGTTA 89.08 225
Cyclophilin CYP2 0.958 0.996 TCTTTCTTGATTCACCACCCACTTG/ CATCTTCGCTGGATACTGTCG 83.39 177
Ribosomal protein L RPL1 1.041 0.997 TGCTCGTGAAGCCGTAAAG/ CAAACCCTGAAGCCTCTGC 84.84 135
Ribosomal protein L RPL2 0.972 0.998 TTTGGCTGGTTCCTGTTTAT/ ACGGTACAAGCAATGTATCCTG 81.40 125