Table 1. Sequencing viral read counts.
Collection location, pool information, and Bunyaviridae read counts from metagenomic virome sequencing of central PA Ixodes scapularis ticks.
Population | N in pool | Sex | SBV L segment reads | SBV S segment reads | BLTV1 L segment reads | BLTV1 S segment reads | Total SBV reads | Total BLTV1 reads |
---|---|---|---|---|---|---|---|---|
APDS | 16 | Female | 10,572 | 53,870 | 15,090 | 22 | 64,442 | 15,112 |
APDS | 14 | Male | 86,173 | 112,175 | 334 | 57 | 198,348 | 391 |
Bear Meadows | 20 | Female | 20,100 | 42,848 | 5 | 0 | 62,948 | 5 |
Bear Meadows | 20 | Male | 50,477 | 60,168 | 20 | 0 | 110,645 | 20 |
Benner Springs | 20 | Female | 64,356 | 125,388 | 2,031 | 6 | 189,744 | 2,037 |
Benner Springs | 20 | Male | 319,538 | 412,178 | 31 | 22 | 731,716 | 53 |
Big Hollow | 20 | Female | 10,231 | 50,032 | 5 | 0 | 60,263 | 5 |
Big Hollow | 15 | Male | 132,159 | 203,425 | 15,276 | 2,368 | 335,584 | 17,644 |
Havershire | 18 | Female | 10,684 | 25,660 | 136 | 0 | 36,344 | 136 |
Havershire | 15 | Male | 45,211 | 57,494 | 135 | 0 | 102,705 | 135 |
Saddleridge | 20 | Female | 30,505 | 38,028 | 749 | 0 | 68,533 | 749 |
Saddleridge | 20 | Female | 9,084 | 15,741 | 760 | 0 | 24,825 | 760 |
Saddleridge | 20 | Male | 47,635 | 74,986 | 9 | 152 | 122,621 | 161 |
Saddleridge | 20 | Male | 31,767 | 46,160 | 15 | 2 | 77,927 | 17 |
Scotia | 20 | Female | 144,187 | 314,304 | 6,066 | 408 | 458,491 | 6,474 |
Scotia | 20 | Female | 146,145 | 288,615 | 9,425 | 857 | 434,760 | 10,282 |
Scotia | 20 | Male | 849,797 | 1,083,252 | 28,885 | 9,576 | 1,933,049 | 38,461 |
Scotia | 20 | Male | 148,980 | 244,248 | 13,998 | 1,779 | 393,228 | 15,777 |