Skip to main content
. 2016 Aug 11;4:e2335. doi: 10.7717/peerj.2335

Table 4. Predicted pKa values for the secondary and tertiary amines shown in Fig. 2, using di- and tri-ethylamine as a reference, respectively.

In the case or piperazine and DABCO the pKa value corresponds to the singly protonated species.

Exp PM6-D3H+/SMD PM6-D3H+/SMD* PM6/SMD* PM6/COSMO*
Secondary amines
Diethylamine 11.1
Morpholine 8.4 7.3 7.8 7.2 7.9
Piperidine 11.2 10.9 11.3 10.8 10.9
Piperazine 9.8 8.8 9.0 8.4 9.1
Pyrrolidine 11.3 11.3 11.1 10.6 11.3
Diallylamine 9.3 8.0 8.7 7.9 8.3
Diisopropylamine 11.0 12.6 12.4 11.7 11.4
MAD 0.9 0.6 1.0 0.5
Max AD 1.6 1.4 1.4 1.0
Tertiary amines
Tri-ethylamine 10.7
N-methyl morpholine 7.4 4.9 5.8 4.6 7.4
Quinuclidine 11.0 8.1 8.7 7.5 9.4
DABCO 8.8 5.1 5.6 4.3 6.7
N-Ethylpyrrolidine 10.4 9.0 9.5 8.6 10.4
Triallylamine 8.3 4.8 6.9 5.2 6.9
Diisopropylmethylamine 10.5 11.8 12.4 11.3 11.5
MAD 2.5 1.9 2.7 1.0
Max AD 3.7 3.2 4.5 2.1

Note:

*

Indicates that the rigid rotor, harmonic oscillator free energy term is neglected.