Figure 3. Microscopic characterization of particle dynamics.
(a) Probability distribution function (PDF) of the end-to-end length L of the jumps. Above LT=7.5 μm, the distribution is well fitted by an exponential function with characteristic length LJ=7.5 μm (solid red line). Inset: PDF of the duration of the jumps. The average is
=1.7 s when considering only jumps of length L≥LT (solid red line). (b) Mean time interval between consecutive jumps, 〈ΔTJ〉, as a function of Nc. The red solid line is the hyperbolic fit used in the simulations, 〈ΔTJ〉=((68.2±8)/Nc)s (Nc in units of 106cells ml−1). Horizontal error bars are the standard deviations of cell concentrations. Inset: PDF of the time interval ΔTJ between consecutive jumps at Nc=(1.56±0.10) × 106 cells ml−1. Black solid line: exponential fit with characteristic time (31.9±4)s. Note that these distributions provide a biased measure of the mean waiting time 〈ΔTJ〉, which should be estimated instead from the average number of jump events as discussed in Supplementary Methods 4. (c) Effective diffusivities, Deff−D0, from the Hele–Shaw experiment (blue circles) and from the simulations: red circles/solid red line for
=1.7 s (slope 1.03 × αHS); red diamonds/dashed red line for
=0.1 s (slope 1.22 × αHS). Vertical error bars represent the uncertainty on the fits to obtain the effective diffusivities. Horizontal error bars are the standard deviations of the cell concentrations. Inset: continuation of the simulated Deff−D0 curves to very high cell concentrations shows saturation to a
-dependent value.