Table 1. Selected NIR FPs engineered from bacterial phytochromes with the demonstrated in vivo applications.
NIR FP | Ex, nm | Em, nm | Extinction coefficient, M−1 cm−1 | Quantum yield, % | Molecular brightness versus iRFP713, % | Oligomeric state | Photostability in mammalian cells, t1/2, s | pKa | Brightness in HeLa cells versus iRFP713, %* | Ref. |
---|---|---|---|---|---|---|---|---|---|---|
miRFP670v1 | 644 | 670 | 71,300±2,100 | 11.6±0.5 | 134 | Monomer | 155±6 | 4.5 | 30.0±1.7 | This work |
miRFP670 | 642 | 670 | 87,400±2,600 | 14.0±0.6 | 198 | 155±5 | 4.5 | 72.0±3.5 | ||
miRFP703 | 674 | 703 | 90,900±2,700 | 8.6±0.5 | 127 | 394±7 | 4.5 | 37.4±2.4 | ||
miRFP709 | 683 | 709 | 78,400±2,400 | 5.4±0.2 | 69 | 192±5 | 4.5 | 30.1±1.9 | ||
mIFP† | 683 (683) | 705 (704) | 65,900±2,000 (82,000) | 6.9±0.9 (8.4) | 74 | Monomer | 54±5 | 4.5 | 14.5±2.9 | 1717 |
IFP2.0†,‡ | 688 (690) | 709 (711) | 72,900±2,200 (98,000) | 6.8±0.2 (8.1) | 80 | Dimer§ | 108±6 | 4.5 | 7.9±1.1 | 1818 |
iRFP670 | 643 | 670 | 114,000 | 12.2 | 225 | Dimer | 290 | 4.0 | 119 | 1616 |
iRFP682 | 663 | 682 | 90,000 | 11.1 | 162 | 490 | 4.5 | 105 | ||
iRFP702 | 673 | 702 | 93,000 | 8.2 | 124 | 630 | 4.5 | 61 | ||
iRFP713 (aka iRFP) | 690 | 713 | 98,000 | 6.3 | 100 | 960 | 4.5 | 100 | 44 | |
iRFP720 | 702 | 720 | 96,000 | 6.0 | 93 | 490 | 4.5 | 110 | 1616 |
FP, fluorescent proteins; NIR, near-infrared. Error, s.d. (n=3).
*Determined as effective NIR fluorescence in transiently transfected live HeLa cells with no supply of exogenous BV and after normalization to fluorescence of co-transfected EGFP.
†Characteristics of IFP1.4, IFP2.0 and mIFP from the original paper17 are shown in parentheses. Parameters determined in this paper are shown without parentheses.
‡Only IFP2.0 is presented as the latest version in a series of the IFP proteins18.