Table 1.
Virus-specific primers used for the multiplex PCR
Virus | Primer | Polarity | Sequence(5′-3′) | Product size (bp) | Reference |
---|---|---|---|---|---|
Group B rotavirus | B5-2 | + | GGCAATAAAATGGCTTCATTGC | 814 | [13] |
B5-3 | - | GGGTTTTTACAGCTTCGGCT | |||
GroupC rotavirus | NG8S1 | + | ATTATGCTCAGACTATCGCCAC | 352 | [13] |
NG8S2 | - | GTTTCTGTACTAGCTGGTGAAC | |||
Adenovirus | Ad1 | + | TTCCCCATGGCICAYAACAC | 482 | [13] |
Ad2 | - | CCCTGGTAKCCRATRTTGTA | |||
Norovirus (GI) | G1-SKF | + | CTGCCCGAATTYGTAAATGA | 330 | [14] |
GI-SKR | - | CCAACCCARCCATTRTACA | |||
Norovirus (GII) | CoG2F | + | CARGARBCNATGTTYAGRTGGATGAG | 387 | [14] |
G2-SKR | - | CCRCCNGCATRHCCRTTRTACAT | |||
Sapovirus | SLV-5317 | + | CTCGCCACCTACRAWGCBTGGTT | 434 | [14] |
SLV-5749 | - | CGGRCYTCAAAVSTACCBCCCCA | |||
Astrovirus | PreCAP1 | + | GGACTGCAAAGCAGCTTCGTG | 719 | [14] |
82b | - | GTGAGCCACCAGCCATCCCT |