Table 1. Selected transcripts that differentially expressed (up- or down-regulated) in SbSDR1 overexpressing transgenic tobacco plant compared with the wild type under stress (salt or osmotic) conditions.
| S. No. | Probe Id | Gene name | Gene accession | Fold Change (log2) |
|---|---|---|---|---|
| Transcripts significantly differentially expressed under salt (200 mM NaCl) stress | ||||
| Transporters | ||||
| 1 | NtPMIa1g79974e2_st | ABC transporter | FH327345 | 6.88 |
| 2 | NtPMIa1g179413e1_s_st | ABC transporter 1 (NtPDR1 gene for PDR-type) | FH465185 | 5.91 |
| 3 | NtPMIa1g58619e1_st | Sulphate transporter | FG143420 | 5.78 |
| 4 | NtPMIa1g52967e1_st | Sugar transporter ERD6 | ET768583 | 4.88 |
| 5 | NtPMIa1g150213e1_s_st | ABC transporter G family member 11 | FH150205 | 4.22 |
| 6 | NtPMIa1g122574e1_st | ABC transporter B family member 21 | FI074394 | 3.74 |
| 7 | NtPMIa1g163746e1_st | ABC transporter C family member 10 | FH377610 | 3.69 |
| 8 | NtPMIa1g143376e1_st | ABC transporter C family member 3/4 | FH290450 | 3.55 |
| 9 | NtPMIa1g3211e1_st | Calcium-transporting ATPase | FI052025 | 3.45 |
| 10 | NtPMIa1g61677e3_st | ABC transporter C family member 15 | FH564659 | 3.34 |
| 11 | NtPMIa1g11150e1_st | MRP-like ABC transporter | FH120467 | 3.29 |
| 12 | NtPMIa1g168421e1_st | Sulphate transporter 3 (low affinity) | FH533814 | 3.15 |
| 13 | NtPMIa1g129050e1_st | ABC transporter B family member 25/27 | FH918583 | 3.07 |
| 14 | NtPMIa1g9139e1_st | Anion transporter 2 | ET929814 | 3.02 |
| 15 | NtPMIa1g79753e1_st | Cation-chloride cotransporter 1 | FH091636 | −3.42 |
| Stress proteins | ||||
| 16 | NtPMIa1g123767e1_st | DNA-binding protein SMUBP-2 | FI077868 | 4.26 |
| 17 | NtPMIa1g56604e1_s_st | NAC domain protein NAC5 | ET045577 | 4.09 |
| 18 | NtPMIa1g81083e1_st | REF/SRPP-like protein/or Stress-related protein | FG187326 | 3.66 |
| 19 | NtPMIa1g44375e1_st | Calcium-binding protein/Calmodulin-like protein 4 | EH617111 | 3.44 |
| 20 | NtPMIa1g141096e1_st | Nuclear transport factor 2 (NTF2) family protein | FH231101 | 3.19 |
| 21 | NtPMIa1g49504e2_st | Heat shock 70 kDa protein | ET710960 | 3.17 |
| 22 | NtPMIa1g82819e3_st | ras-related protein Rab7-like/Small GTP-binding protein | ET802996 | 3.17 |
| 23 | NtPMIa1g71923e1_s_st | G-box-binding factor 1-like | ET047835 | 3.16 |
| Stress responsive genes/channels | ||||
| 24 | NtPMIa1g21515e1_s_st | PR-5 Gene | FH357120 | 6.91 |
| 25 | NtPMIa1g138004e1_s_st | NtPOX1 (peroxidase) | FG146731 | 6.29 |
| 26 | NtPMIa1g144683e1_st | str246C gene | FH548471 | 5.88 |
| 27 | NtPMIa1g42792e1_st | Osmotin-like (OLP1) | FH990179 | 4.89 |
| 28 | NtPMIa1g42154e2_st | Peroxidase | FH663398 | 4.79 |
| 29 | NtPMIa1g29557e1_st | Sodium/hydrogen exchanger 8-like | ET764618 | 4.53 |
| 30 | NtPMIa1g201506e1_st | Superoxide dismutase | EH619039 | 4.44 |
| 31 | NtPMIa1g193487e1_st | Glutathione S-Transferase | ET691311 | 4.38 |
| 32 | NtPMIa1g46700e1_st | Sodium/hydrogen exchanger | FH050971 | 4.04 |
| 33 | NtPMIa1g4232e2_s_st | Aquaporin TIP3-2 (tonoplast intrinsic protein) | FH043168 | 3.83 |
| 34 | NtPMIa1g35785e3_st | Potassium channel AKT1-like | ET966045 | 3.70 |
| 35 | NtPMIa1g46700e3_s_st | Na+/H+ antiporter/or sodium/hydrogen exchanger | FI072621 | 3.55 |
| 36 | NtPMIa1g47884e3_st | Calcium channel (two pore) protein 1 | FH134749 | 3.46 |
| Transcription factors | ||||
| 37 | NtPMIa1g31907e2_s_st | Transcription factor (WRKY) 31 | FG161188 | 5.64 |
| 38 | NtPMIa1g80200e5_st | Transcription factor TGA1/Basic leucine zipper protein | FG197996 | 4.60 |
| 39 | NtPMIa1g214476e1_st | Transcription factor (WRKY) 6 | ET043797 | 4.17 |
| 40 | NtPMIa1g51042e1_st | Transcription factor ILR3-like | ET854451 | 3.94 |
| 41 | NtPMIa1g50790e2_st | Transcription factor TCP3 | ET046638 | 3.88 |
| 42 | NtPMIa1g43220e3_st | Transcription factor (WRKY) 21 | FH187095 | 3.72 |
| 43 | NtPMIa1g155166e1_st | Transcription factor LUX | ET694713 | 3.62 |
| 44 | NtPMIa1g50790e1_st | Transcription factor TCP4-like | ET980639 | 3.57 |
| 45 | NtPMIa1g53553e2_x_st | Transcription factor Bhlh041 | FH670186 | 3.53 |
| 46 | NtPMIa1g32403e1_st | Transcription factor (WRKY) 43 | ET049847 | 3.40 |
| 47 | NtPMIa1g99480e1_s_st | Transcription factor (GATA) 25 | FH991549 | 3.17 |
| 48 | NtPMIa1g80077e2_st | transcription factor JUNGBRUNNEN 1-like | FI039736 | 3.03 |
| 49 | NtPMIa1g178470e1_s_st | Transcription factor family-PLATZ- protein | ET042575 | −3.15 |
| 50 | NtPMIa1g93305e1_st | Ethylene-responsive transcription factor | FH965889 | −3.17 |
| Uncharacterised | ||||
| 51 | NtPMIa1g184611e1_s_st | Uncharacterised | EH617968 | 6.21 |
| 52 | NtPMIa1g112984e1_s_st | Uncharacterised | ET991956 | 5.60 |
| 53 | NtPMIa1g59636e1_st | Uncharacterised | FH622649 | 5.58 |
| 54 | NtPMIa1g127287e1_st | Uncharacterised | FH333853 | −5.69 |
| 55 | NtPMIa1g93939e1_st | Uncharacterised | FH331817 | −3.38 |
| 56 | NtPMIa1g125877e1_x_st | Uncharacterised | FI084463 | −3.29 |
| Zinc finger protein | ||||
| 57 | NtPMIa1g1891e1_s_st | Zinc induced facilitator like | FI027112 | 5.19 |
| 58 | NtPMIa1g97020e1_st | Zinc metalloprotease (ATP-dependent) | FH980189 | 3.78 |
| Transcripts significantly differentially expressed under osmotic (300 mM mannitol) stress | ||||
| Transporters | ||||
| 1 | NtPMIa1g179293e1_st | ABC transporter G family member 35 | FH628071 | 4.01 |
| 2 | NtPMIa1g200291e1_st | ABC transporter B family member 21 | FH968229 | 3.35 |
| 3 | NtPMIa1g118531e1_st | ABC transporter A family member 11 | ET925380 | 2.88 |
| 4 | NtPMIa1g19057e2_st | ABC transporter G family member 3 | FH326473 | 2.85 |
| 5 | NtPMIa1g173628e1_s_st | Sucrose transport protein SUC3 | ET942104 | 2.71 |
| 6 | NtPMIa1g42126e1_s_st | ABC transporter B family member 25 | FH321728 | 2.55 |
| 7 | NtPMIa1g47623e1_st | Sulfate transporter | FH062478 | −3.64 |
| Stress responsive proteins/genes/channels | ||||
| 8 | NtPMIa1g136207e1_st | Protein kinase (receptor-like) | FH084028 | 4.92 |
| 9 | NtPMIa1g78543e3_st | Aquaporin-4 | FH137367 | 2.76 |
| 10 | NtPMIa1g57744e1_st | Anionic peroxidase gene/Peroxidase | FH308715 | 2.68 |
| 11 | NtPMIa1g82649e2_st | Plasma membrane H+ ATPase | FH091813 | 2.43 |
| 12 | NtPMIa1g190637e1_x_st | Mitogen-activated protein kinase kinase kinase NPK1 | FH176408 | 2.41 |
| 13 | NtPMIa1g17460e1_s_st | Heat shock protein (class II) | FH127057 | −3.54 |
| 14 | NtPMIa1g40121e1_st | Cytochrome P450 | FG196194 | −3.09 |
| 15 | NtPMIa1g201049e1_st | Heat shock protein 101 | ET915891 | −2.98 |
| Transcription factors | ||||
| 16 | NtPMIa1g2222e1_st | Transcription factor (WRKY) 41 | FI020184 | 2.87 |
| 17 | NtPMIa1g82333e1_st | Transcription factor bHLH55 | FH551099 | 2.38 |
| 18 | NtPMIa1g122488e1_st | Transcription factor (heat stress) B-2a | ET044925 | −2.52 |
| 19 | NtPMIa1g123702e2_st | Transcription factor (WRKY) 33 | FI077699 | −2.33 |
| Uncharacterised | ||||
| 20 | NtPMIa1g140270e1_st | Uncharacterised | FG168624 | 3.49 |
| 21 | NtPMIa1g82079e2_st | Uncharacterised | ET983581 | 3.35 |
| 22 | NtPMIa1g38269e1_st | Uncharacterised | ET920361 | −3.26 |
| 23 | NtPMIa1g180425e1_s_st | Uncharacterised GPI-anchored protein | FH467984 | −2.96 |
No sign indicates up-regulation, whereas “−” sign shows down-regulation. Fold-expression is significant at ANOVA p < 0.05.