Skip to main content
. Author manuscript; available in PMC: 2016 Aug 23.
Published in final edited form as: J Biomed Inform. 2015 Aug 1;58(Suppl):S92–S102. doi: 10.1016/j.jbi.2015.07.016

Table 4.

CAD: Comparison of F1 measure for CAD models between 2008, 2014 and combined 2008/2014 broken down by SVM kernel, weighting scheme, and feature space.

Kernel Weight Feature Space 2008 2014 Combined 2008/2014 % Change 2008, 2014 % Change 2008, Comb. % Change 2014, Comb.
RBF tf-idf Min 0.841†† 0.896 0.878 6.54** 4.37** −2.03
RBF tf-idf Min, Lex & CUI 0.827†† 0.891 0.872 7.73** 5.47** −2.10
RBF tf-idf Min & Lex 0.829†† 0.883 0.871 6.62** 5.12** −1.41
Linear tf-idf Min & Lex 0.805†† 0.882 0.843†† 9.62** 4.77** −4.42**
Linear tf-idf Lex 0.815†† 0.881 0.844†† 8.09** 3.47** −4.28**
RBF tf-idf Lex 0.748†† 0.875 0.876 17.01** 17.09** 0.07
Linear tf-idf Min, Lex & CUI 0.793†† 0.875 0.846†† 10.34** 6.72** −3.28*
Linear tf-idf Min 0.809†† 0.872†† 0.841†† 7.87** 3.96** −3.63**
Linear tf-idf Min & CUI 0.788†† 0.868†† 0.861†† 10.15** 9.30** −0.77
Linear tf-idf Lex & CUI 0.780†† 0.863†† 0.851†† 10.60** 9.06** −1.39
RBF tf-idf Min & CUI 0.820†† 0.863†† 0.868 5.16** 5.77** 0.58
RBF Count Min 0.727†† 0.861†† 0.830†† 18.40** 14.10** −3.63
RBF Count Lex 0.792†† 0.858†† 0.833†† 8.37** 5.14** −2.97*
RBF Count Lex & CUI 0.765†† 0.857†† 0.837†† 12.00** 9.41** −2.31
RBF tf-idf Lex & CUI 0.782†† 0.855†† 0.881 9.29** 12.68** 3.10
Linear Count Lex & CUI 0.737†† 0.851†† 0.791†† 15.51** 7.33** −7.09**
RBF Count Min & CUI 0.696†† 0.851†† 0.830†† 22.23** 19.16** −2.51
RBF Count Min & Lex 0.670†† 0.844†† 0.843†† 25.87** 25.73** −0.11
Linear Count Lex 0.698†† 0.841†† 0.814†† 20.47** 16.66** −3.16
Linear Count Min, Lex & CUI 0.698†† 0.840†† 0.767†† 20.32** 9.86** −8.69**
Linear Count Min & Lex 0.674†† 0.835†† 0.799†† 23.89** 18.51** −4.34*
RBF Count Min, Lex & CUI 0.714†† 0.832†† 0.842†† 16.57** 17.89** 1.13
Linear Count Min 0.682†† 0.825†† 0.795†† 21.05** 16.62** −3.66
Linear Count Min & CUI 0.669†† 0.824†† 0.797†† 23.30** 19.20** −3.32
RBF tf-idf CUI 0.608†† 0.689†† 0.732†† 13.29** 20.43** 6.30*
Linear tf-idf CUI 0.610†† 0.674†† 0.654†† 10.65** 7.31* −3.01
RBF Count CUI 0.631†† 0.616†† 0.616†† −2.41 −2.46 −0.04
Linear Count CUI 0.542†† 0.538†† 0.548†† −0.65 1.23 1.89
*

percent change significant at alpha = 0.05

**

percent change significant at alpha = 0.1

statistically significantly different from highest performing model (emphasized above) at alpha = 0.05

††

statistically significantly different from highest performing model (emphasized above) at alpha =0.1

Note: For visual reference, models which are not statistically significantly different from the emphasized model at alpha = 0.1 are shaded in dark grey. Models which are not statistically significantly different from the emphasized model at alpha = 0.05 are shaded in light grey