Table 1.
Comparison of the SMRT and HiSeq assemblies of isolate 2516. The statistics for the SMRT assembly were extracted from the final version of the assembly: four core chromosomes and 172 supernumerary contigs
| SMRT assembly | HiSeq assembly | |
|---|---|---|
| Number of contigs | 176 | 1253 |
| Average coverage | 20.2 | 111.5 |
| Total sequence length (bp) | 46309701 | 39020932 |
| Average sequence length (bp) | 263123 | 31142 |
| Minimum sequence length (bp) | 10816 | 1004 |
| Maximum sequence length (bp) | 11790407 | 701709 |
| N50 sequence index (# of contigs) | 2 | 62 |
| N50 sequence length (bp) | 8783590 | 170721 |