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. 2016 Aug 22;16(1):165. doi: 10.1186/s12862-016-0740-y

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© The Author(s) 2016

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Duplication and gene loss at the ddx-27 locus. a Gene tree of ddx-27. ddx-27 is conserved across all analyzed nematode genomes. b Gene tree of Y71G1G12B.25 and Y71G1G12B.26. c Genomic configuration of host gene and ASTs in 20 nematode genomes. With exception of T. spiralis, it has up to two ASTs that have most likely arisen through a duplication event in the ancestor of clade IV and V nematodes. Subsequently, one of the copies was lost independently in various lineages. The ddx-27 locus in M. incognita was split between Minc_Contig329 and Minc_Contig2119. The genes Y71G1G12B.25 and Y71G1G12B.26 could be identified in both Meloidogyne species but had large gaps and were therefore not included in the phylogenetic analysis