Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2016 Aug 24;6:31725. doi: 10.1038/srep31725

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2016, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

PMC Copyright notice

The performance of CAS, PAS, funsim, and PROFILE (the cumulative number of correct enzyme recognized within certain top ranks) was examined using five different resolution levels of GO terms of candidates, parental term mappings to the 3^rd, 4^th, 5^th, and 6^th level in the GO hierarchy as well as the original GO annotations. The relatedness score (Eq. 7) with the 1^st level neighbors (k = 1) was used (showed N1 in the figure legend). (A) CAS. MRR using the GO level 3, 4, 5, 6, and the original annotation were 0.002, 0.104, 0.184, 0.207, and 0.199, respectively. (B) PAS. MRR were 0.004, 0.023, 0.054, 0.081, and 0.072, respectively, for the same order of GO annotation levels as CAS. (C) funsim. MRR were 0.041, 0.104, 0.135, 0.155, and 0.173, respectively. (D) PROFILE. MRR were 0.058, 0.314, 0.416, 0.541, and 0.617, respectively.