Table 3. Potential and limitations of gene editing strategies at mono- and multigenic level.
Modification | Potential | Limitations | Alternatives |
---|---|---|---|
Monogenic | Genetic correction of patient backgrounds provides ideal isogenic controls for in vitro disease modeling (reduced experimental ‘noise') | Strategy cannot be faithfully applied to diseases based on large CNVs (for example, chromosomal deletion syndromes). | (i) Inducible expression of candidate transgene targeted to genomic ‘safe harbor' locus151 (ii) Engineering allelic series into isogenic standard background149 |
Multigenic | Introduction of additional risk variants or protective alleles into patient backgrounds could provide mechanistic insight into disease modulation and serve as a tool to aggravate or mitigate in vitro phenotypes | Variant modeling studies are complicated by (i) the large number of SNPs in linkage disequilibrium and (ii) limited information to guide the choice of relevant variants. | Automated high-throughput in vitro analysis of patient cohorts stratified according to risk and/or protective factors (Figure 2). |
Abbreviation: CNV, copy number varient; SNP, single nucleotide polymorphism.