Table 1.
Feature | ACC | SN | SP | MCC | AUC |
---|---|---|---|---|---|
D + PSSM + SS + SA + PC | 0.650 | 0.540 | 0.761 | 0.309 | 0.705 |
D + PSSM + SS + PC | 0.653 | 0.529 | 0.777 | 0.316 | 0.705 |
D + PSSM + SS | 0.658 | 0.516 | 0.801 | 0.330 | 0.700 |
D + PSSM | 0.644 | 0.503 | 0.785 | 0.300 | 0.691 |
D | 0.639 | 0.442 | 0.835 | 0.301 | 0.671 |
SS | 0.555 | 0.770 | 0.339 | 0.121 | 0.559 |
PSSM | 0.575 | 0.578 | 0.573 | 0.150 | 0.590 |
SA | 0.557 | 0.552 | 0.562 | 0.114 | 0.554 |
PCP | 0.525 | 0.611 | 0.439 | 0.051 | 0.542 |
The results are sorted by AUC value. The feature set in bold was selected as the optimal
D sequential distance to adjacent cysteines, PSSM PSSM profile, SS predicted secondary structure, SA predicted solvent accessibility, PCP physical-chemical property