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. 2016 Aug 19;84(9):2703–2713. doi: 10.1128/IAI.00377-16

TABLE 1.

Fold change in transcript levels of the genes analyzed in Fig. 2 and 3

Gene name Function No. of Trp codons Fold change in transcript in IFN-γ-treated cells from 24 to 48 hpia
mreB Cell division 0 0.63 ± 0.26
rodZ Cell division 5 5.91 ± 0.47
nusA Transcription 0 0.75 ± 0.19
nusG Transcription 4 2.34 ± 0.47
dksA Transcription 0 0.70 ± 0.34
rho Transcription 0 1.11 ± 0.03
obg Translation 2 8.57 ± 3.29
ubiA Metabolism 5 7.90 ± 1.90
groEL_1 Chaperone 0 0.16 ± 0.12
groEL_2 Chaperone 2 1.96 ± 0.29
groEL_3 Chaperone 1 1.74 ± 0.41
clpP_1 Protein degradation 3 1.65 ± 0.05
clpP_2 Protein degradation 0 0.35 ± 0.09
rsbV_1 Transcription 0 0.95 ± 0.22
rsbV_2 Transcription 0 1.23 ± 0.37
a

P = 0.0001 and r = 0.8560 by Spearman rank correlation analysis for fold change versus Trp content.