TABLE 1.
Gene name | Function | No. of Trp codons | Fold change in transcript in IFN-γ-treated cells from 24 to 48 hpia |
---|---|---|---|
mreB | Cell division | 0 | 0.63 ± 0.26 |
rodZ | Cell division | 5 | 5.91 ± 0.47 |
nusA | Transcription | 0 | 0.75 ± 0.19 |
nusG | Transcription | 4 | 2.34 ± 0.47 |
dksA | Transcription | 0 | 0.70 ± 0.34 |
rho | Transcription | 0 | 1.11 ± 0.03 |
obg | Translation | 2 | 8.57 ± 3.29 |
ubiA | Metabolism | 5 | 7.90 ± 1.90 |
groEL_1 | Chaperone | 0 | 0.16 ± 0.12 |
groEL_2 | Chaperone | 2 | 1.96 ± 0.29 |
groEL_3 | Chaperone | 1 | 1.74 ± 0.41 |
clpP_1 | Protein degradation | 3 | 1.65 ± 0.05 |
clpP_2 | Protein degradation | 0 | 0.35 ± 0.09 |
rsbV_1 | Transcription | 0 | 0.95 ± 0.22 |
rsbV_2 | Transcription | 0 | 1.23 ± 0.37 |
P = 0.0001 and r = 0.8560 by Spearman rank correlation analysis for fold change versus Trp content.