Mechanism of colour discrimination in H. halobium phototaxis. Photon absorption by sR587, the dark-adapted form of sensory rhodopsin, generates a short-lived species S680 which rapidly decays to S373. The S373 form can return to the sR587 form by either of two paths: a purely thermal relaxation or a photoinduced path. If S373 does not absorb a photon, it relaxes thermally to sR587 completing the ‘one-photon’ photocycle. During its transit through the one-photon cycle, the sensory rhodopsin molecule generates an attractant signal to the flagellar motor. If S373 absorbs a photon, it generates the intermediate
. The relaxation of
to sR587 completes a cycle containing two photon absorption steps. After absorption of the second photon in the ‘two-photon’ cycle, sensory rhodopsin generates a repellent signal to the flagellar motor. The attractant and repellent signals are integrated prior to or at their site of action on the flagellar motor3.