Skip to main content
. 2016 Aug 10;8(8):488. doi: 10.3390/nu8080488

Table 4.

Annotation of LC group hypomethylated promoter genes (p value < 0.00001).

Term Term Number Count p-Value Fold Enrichment
Biological process - - - -
regulation of transcription GO:0045449 189 1.83×10−9 1.5015
transcription GO:0006350 158 2.21×10−9 1.5775
chromatin organization GO:0006325 43 1.75×10−7 2.4151
chromatin modification GO:0016568 33 3.57×10−6 2.4737
chromosome organization GO:0051276 46 9.60×10−6 2.0145
regulation of transcription from RNA polymerase II promoter GO:0006357 62 1.19×10−5 1.7807
regulation of transcription, DNA-dependent GO:0006355 118 5.50×10−5 1.4250
negative regulation of transcription, DNA-dependent GO:0045892 36 6.18×10−5 2.0679
negative regulation of gene expression GO:0010629 44 6.38×10−5 1.8987
negative regulation of transcription GO:0016481 41 6.63×10−5 1.9500
regulation of RNA metabolic process GO:0051252 119 6.89×10−5 1.4149
negative regulation of RNA metabolic process GO:0051253 36 7.05×10−5 2.0546
glycoprotein biosynthetic process GO:0009101 19 9.41×10−5 2.8731
Cellular componts - - - -
nuclear lumen GO:0031981 86 2.10×10−8 1.8592
intracellular organelle lumen GO:0070013 101 8.79×10−8 1.7017
organelle lumen GO:0043233 101 1.00×10−7 1.6972
endomembrane system GO:0012505 58 2.07×10−7 2.0695
membrane-enclosed lumen GO:0031974 102 2.64×10−7 1.6585
Golgi apparatus GO:0005794 68 3.70×10−7 1.9034
nucleoplasm GO:0005654 57 1.54×10−5 1.8165
Golgi apparatus part GO:0044431 29 2.07×10−5 2.4388
Golgi membrane GO:0000139 20 9.16×10−5 2.7868
Molecular Function - - - -
DNA binding GO:0003677 167 1.62×10−12 1.6952
transcription regulator activity GO:0030528 113 1.85×10−8 1.6939
transcription factor activity GO:0003700 76 1.22×10−6 1.7706
metal ion binding GO:0046872 260 8.05×10−5 1.2209
cation binding GO:0043169 262 8.06×10−5 1.2192