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. Author manuscript; available in PMC: 2017 Aug 1.
Published in final edited form as: Mol Microbiol. 2016 Jun 10;101(4):625–644. doi: 10.1111/mmi.13414

Table 1.

Whole genome sequence coverage of L5 and RedRock lysogens

Phage
reads1 		viral
end
reads
(#)2 		attL/attR
reads (#)		 attP
reads
(#)		 Coverage:
Phage		 Coverage:
M.smegmatis 		Phage:Host
coverage
mc2155(L5) 41,053 23 141 2 58.9 62.5 0.94
mc2155(RedRock) 105,978 0 N/A N/A 149 61.8 2.41
1

Reads mapping to phage genome out of a total of 5.8 million per sample

2

Reads beginning at precisely the terminus of viral genomic DNA