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. 2016 Aug 26;6:32224. doi: 10.1038/srep32224

Table 1. The number and frequency of microsatellites in the whole genomes of 14 sequenced Poaceae species and three other plants.

Species Whole genome
Microsatellite Type (%)
Genome Size (Mb) GC Content (%) SSRs Number SSRs Frequency (Number per Mb) MNRs DNRs TNRs TeNRs PNRs HNRs
Brachypodium distachyon 271.92 46.21 51981 191.16 58.95 18.12 20.48 1.90 0.38 0.16
Oryza sativa 373.25 43.55 135501 363.03 47.86 27.57 22.04 1.90 0.45 0.19
Setaria italica 405.74 45.6 61931 152.64 54.24 21.11 21.83 2.13 0.44 0.26
Sorghum bicolor 738.54 41.49 129564 175.43 43.15 29.44 21.98 4.14 0.73 0.56
Triticum monococcum 1208.99 47.12 207430 171.57 48.79 32.24 16.54 2.07 0.24 0.11
Aegilops sharonensis 1603.87 46.21 216638 135.07 44.02 33.38 19.94 2.22 0.27 0.18
Aegilops speltoides 1760.38 45.97 301460 171.25 52.54 29.04 16.12 1.93 0.24 0.12
Phyllostachys heterocycla 2051.72 39.35 302615 147.49 50.20 37.13 9.81 1.94 0.42 0.51
Zea mays 2066.43 46.6 198939 96.27 43.18 32.77 21.53 1.67 0.54 0.31
Triticum turgidum (Strongfield) 3119.31 46.16 451421 144.72 47.25 33.98 16.47 1.95 0.22 0.14
Triticum turgidum (Langdon) 3139.70 46.76 472611 150.53 47.58 33.09 17.07 1.91 0.22 0.13
Hordeum vulgare 1868.65 43.19 289981 155.18 45.47 32.12 20.16 1.85 0.27 0.14
Triticum aestivum (Version 2, 2014 May) 10138.70 44.63 1064878 105.03 28.97 47.24 21.75 1.62 0.20 0.21
Triticum urartu 4660.79 38.2 456045 97.85 32.32 43.75 21.77 1.59 0.15 0.41
Aegilops tauschii 4147.41 37.75 422271 101.82 36.49 39.83 21.84 1.45 0.17 0.22
Arabidopsis thaliana 119.67 36 50092 418.59 69.56 18.74 11.17 0.34 0.08 0.11
Populus trichocarpa 417.14 32.57 278606 667.90 69.83 19.49 9.02 1.14 0.28 0.24
Glycine max 973.34 34.1 405325 416.43 64.56 24.64 9.48 0.98 0.29 0.07