TABLE 1 .
Strain characteristics, sequencing statistics, genome information, and accession numbersa
Strain | Source | BioSample no. | Accession no. | Avg coverage of HGAP assembly (×) | Size (Mbp) | No. of contigs | G+C content (%) | No. of PEGs | No. of CDSs |
---|---|---|---|---|---|---|---|---|---|
TMW 1.1988 | Light wheat beer | SAMN04505726 | CP014623 to CP014633 | 121 | 2.82 | 11 | 40.8 | 2,671 | 2,495 |
TMW 1.1989 | Beer | SAMN04505727 | CP014873 to CP014880 | 89 | 2.85 | 8 | 40.8 | 2,646 | 2,496 |
TMW 1.1991 | Brewery environment | SAMN04505728 | CP014881 to CP014889 | 99 | 2.82 | 9 | 40.7 | 2,590 | 2,437 |
TMW 1.1992 | Brewery environmentb | SAMN04505729 | CP014890 to CP014898 | 109 | 2.78 | 9 | 40.8 | 2,621 | 2,450 |
TMW 1.2002 | Brewery environmentb | SAMN04505730 | CP014899 to CP014906 | 168 | 2.84 | 8 | 40.7 | 2,653 | 2,478 |
All strains (BioSamples) have beer spoilage ability and have been isolated from German breweries. All BioSamples are part of the BioProject PRJNA290141. Accession numbers are listed for all contigs of each whole genome (as range). Number of contigs are from chromosome plus plasmids and partial plasmids (only the case for TMW 1.1992). PEG, protein-encoding genes based on RAST annotation; CDS, coding sequences (coding) based on NCBI PGAP.
TMW 1.1992 and TMW 1.2002 are from the same brewery.