Table 5. Results of linkage disequilibrium analysis based on allelic profile data from five genetic loci.
City/subpopulation | No. | Hd | ISA | PMC | VD | L | VD > L |
---|---|---|---|---|---|---|---|
Changchun | 34 | 0.6913 ± 0.0326 | 0.3763 | < 0.001 | 2.62 | 1.1664 | Y |
Daqing | 22 | 0.5740 ± 0.0267 | 0.6389 | < 0.001 | 4.2961 | 1.4005 | Y |
Harbin | 29 | 0.2739 ± 0.0737 | 0.4417 | < 0.001 | 2.4508 | 1.1817 | Y |
Qiqihar | 16 | 0.4717 ± 0.1335 | 0.2733 | < 0.001 | 1.8621 | 1.1226 | Y |
Total (4 cities) | 101 | 0.7986 ± 0.0406 | 0.3768 | < 0.001 | 1.9338 | 0.8009 | Y |
Total (4 cities)a | 44 | 0.8408 ± 0.0334 | 0.1441 | < 0.001 | 1.0197 | 0.7022 | Y |
SP1 | 66 | 0.8366 ± 0.0351 | 0.1191 | < 0.001 | 0.9725 | 0.7001 | Y |
SP2 | 39 | 0.1976 ± 0.0577 | 0.3729 | < 0.001 | 1.8093 | 0.9471 | Y |
SP3 | 35 | 0.6971 ± 0.0605 | 0.4709 | < 0.001 | 2.8327 | 1.0886 | Y |
SP4 | 41 | 0.5276 ± 0.0748 | 0.4866 | < 0.001 | 3.3424 | 1.3644 | Y |
SP5 | 26 | 0.5292 ± 0.1023 | 0.2535 | < 0.001 | 3.3424 | 1.3644 | Y |
Total (5 subpopulations) | 207 | 0.8988 ± 0.0180 | 0.4666 | < 0.001 | 1.2845 | 0.4563 | Y |
Total (5 subpopulations)a | 105 | 0.9178 ± 0.0193 | 0.1577 | < 0.001 | 0.6030 | 0.3821 | Y |
Hd: mean genetic diversity; ISA: standardized index of association calculated using the program LIAN 3.5; PMC: significance for obtaining this value in 1000 simulations using the Monte Carlo method; VD: variance of pairwise differences; L: 95% critical value for VD; VD > L indicates linkage disequilibrium.
a Considering isolates with the same MLG as one individual.