Table 1.
List of primers and primer sequences used for detection of antimicrobial resistance genes
| Antibiotic | Method | Primer | Sequence (5’–3’) | Amplicon length (bp) | Reference |
|---|---|---|---|---|---|
| Erythromycin | MAMA–PCRa | 23SRNA-F ERY2075-R ERY2074-R |
TTA GCT AAT GTT GCC CGT ACC G TAG TAA AGG TCC ACG GGG TCG C AGT AAA GGT CCA CGG GGT CTG G |
485 | [17] |
| PCR–RFLPa | F2-campy-23S R2-campy-23S |
AAT TGA TGG GGT TAG CAT TAG C CAA CAA TGG CTC ATA TAC AAC TGG |
316 | [20] | |
| Ciprofloxacin | MAMA–PCRb | CampyMAMAgyrA1 CampyMAMAgyrA5 |
TTT TTA GCA AAG ATT CTG AT CAA AGC ATC ATA AAC TGC AA |
265 | [19] |
| MAMA–PCRc | GZgyrACcoli3F CanpyMAMAgyrA8 |
TAT GAG CGA TAT TAT CGG TC TAA GGC ATC GTA AAC AGC CA |
192 | [24] | |
| Tetracycline | tet(O) PCR | DMT 1 DMT 2 |
GGC GTT TTG TTT ATG TGC G ATG GAC AAC CCG ACA GAA GC |
559 | [25] |
| tet(A) PCR | Tet(A)-F Tet(A)-R |
GTG AAA CCC AAC ATA CCC C GAA GGC AAG CAG GAT GTA G |
888 | [18] | |
| tet(A) PCR | tet-A-1 tet-A-2 |
GCT CAC GTT GAC GCA GGA AAG ATC GTC ATT GTC CGT TAC |
486 | This study |
a23S rRNA gene mutation
b gyrA gene mutation Campylobacter jejuni
c gyrA gene mutation Campylobacter coli