Table 3.
Differential expressed known miRNAs during the sacred lotus seed germination
Change | miRNA | 0 h-std | 12 h-std | 24 h-std | 36 h-std | 72 h-std | Significance |
---|---|---|---|---|---|---|---|
Up-regulated | Nnu-miR156c-5p | 6.68 | 10.04 | 10.59 | 12.26 | 8.62 | * |
Nnu-miR157a | 56.90 | 100.44 | 144.83 | 169.62 | 69.79 | ** | |
Nnu-miR159a | 164.04 | 434.63 | 1008.33 | 1065.40 | 334.58 | ** | |
Nnu-miR160b | 6.99 | 10.04 | 16.09 | 13.28 | 11.49 | ** | |
Nnu-miR162a-3p | 78.52 | 132.40 | 218.52 | 125.68 | 167.91 | ** | |
Nnu-miR165a-5p | 8.27 | 25.26 | 45.31 | 32.02 | 20.12 | ** | |
Nnu-miR165a-3p | 5100.3 | 10745.91 | 18344.31 | 10534.78 | 10529.28 | ** | |
Nnu-miR166b-5p | 0.64 | 1.52 | 6.78 | 6.47 | 6.57 | ** | |
Nnu-miR166c | 5106.39 | 10766.00 | 18370.99 | 10560.33 | 10551.04 | ** | |
Nnu-miR166d | 2117.83 | 5231.12 | 9055.48 | 5330.06 | 4818.39 | ** | |
Nnu-miR167a-3p | 0 | 0.3 | 1.27 | 1.70 | 0.41 | * | |
Nnu-miR2111b | 2.86 | 8.83 | 8.89 | 6.47 | 7.39 | ** | |
Nnu-miR319b | 103.63 | 150.05 | 214.29 | 149.52 | 114.13 | ** | |
Nnu-miR319d | 736.57 | 1670.66 | 2534.59 | 1737.40 | 1320.68 | ** | |
Down-regulated | Nnu-miR1030 | 4.45 | 3.04 | 1.69 | 1.70 | 1.23 | * |
Nnu-miR170a | 33.06 | 15.52 | 29.22 | 29.63 | 12.73 | ** | |
Nnu-miR171g | 33.38 | 16.44 | 30.07 | 29.97 | 12.73 | ** | |
Nnu-miR2111a-5p | 137.01 | 98.01 | 99.10 | 122.62 | 55.83 | ** | |
Nnu-miR393a-5p | 57.86 | 39.87 | 42.77 | 37.13 | 28.74 | ** | |
Nnu-miR393c | 57.22 | 38.65 | 42.35 | 36.78 | 28.33 | ** | |
Nnu-miR394a | 61.67 | 19.18 | 28.37 | 30.99 | 22.58 | ** | |
Nnu-miR394b | 103.32 | 44.13 | 52.09 | 53.13 | 32.43 | ** | |
Nnu-miR396b-3p | 8.27 | 1.83 | 3.39 | 1.70 | 1.23 | ** | |
Nnu-miR408a | 13.35 | 6.09 | 8.05 | 12.26 | 5.34 | ** | |
Nnu-miR408c | 29.56 | 17.04 | 20.75 | 24.18 | 16.01 | ** | |
Nnu-miR530a | 4.45 | 3.04 | 1.69 | 1.70 | 1.23 | * |
"std" represents normalized expression level (Normalised expression, RPM) of miRNAs
"*" and "**" represnent significant differentially expression between 0 h and other hours, *p < 0.05, **p < 0.01