Table 5.
Association analyses for known heading date genes in the indica and japonica subpopulations based on haplotypes using 425 accessions.
| Gene | N (Ind, Jap)∗ | Subpop | Wuhan |
Hainan |
||
|---|---|---|---|---|---|---|
| P (2013) | P (2014) | P (2012) | P (2013) | |||
| Hd17 | 6 (6, 2) | Ind | 9.4E-06 | 2.6E-08 | ||
| Jap | 1.3E-08 | 1.5E-08 | ||||
| Hd3a | 6 (6, 2) | Ind | 1.8E-07 | 3.8E-09 | ||
| RCN1 | 3 (3, 1) | Ind | 2.6E-11 | 2.3E-08 | ||
| Ehd1 | 5 (3, 3) | Jap | 5.3E-16 | 2.0E-12 | ||
| OsMADS56 | 7 (3, 4) | Jap | 1.8E-09 | 6.3E-09 | ||
| Ghd7 | 6 (4, 2) | Ind | 1.5E-19 | 8.2E-17 | 3.1E-18 | 9.4E-10 |
| Ghd7.1 | 14 (5, 10) | Jap | 1.5E-11 | 5.9E-11 | 3.5E-21 | 1.9E-23 |
∗N was the number of haplotypes in 425 accessions. The numbers inside the parentheses are the numbers of haplotypes in the indica and japonica subpopulations, respectively. P is P-value in ANOVA.