Table 1. Parameter Inputs to the Langevin Dynamics Simulations for Each Case.
flat | small barrier | urea | codeine | |
---|---|---|---|---|
Rhyd (Å) | 5 | 5 | 2.86 | 4.32 |
mass (g/mol) | 20 | 20 | 60 | 299 |
T (K) | 298 | 298 | 298 | 298 |
brute dt (s) | 1 × 10–12 | 1 × 10–12 | 1 × 10–12 | 1 × 10–12 |
milestone dt (s) | 1 × 10–15 | 1 × 10–15 | 1 × 10–15 | 1 × 10–15 |