Table 1. All the gathered DNA methylomes.
Human (26) | ||||
---|---|---|---|---|
Brain | ESC/iPSC* | FPGC | MPGC | Oocyte |
7 | 6 | 5 | 5 | 3 |
AdFront_Wen | H1_Lis | 10wE1_GuoF | 10wE2_GuoF | AmpMinus_Okae |
FcF53yNeun_Lis | H9_Lis | 11wE1_GuoF | 19wE1_GuoF | AmpPlus_Okae |
FcM55yNeun_Lis | PBAT_Tang | 17wE1_GuoF | 19wE2_GuoF | Rrbs_GuoHS |
FCN_Zill | Ads_Lis* | 7w_Tang | 9w_Tang | |
Hs1570_Zeng | Ff_Lis* | UW160_Gkoun | UW165_Gkoun | |
Hs1832_Zeng | Imr90_Lis* | |||
Mfg12y_Lis | ||||
Mouse (25) | ||||
Brain | ESC | FPGC | MPGC | Oocyte |
8 | 8 | 2 | 3 | 4 |
129_Xie | 2line_Kob | E13p5_Seis | E13p5_Seis | GV_Kob |
Cast_Xie | J1_Seis | E16p5_Seis | E16p5_Kob | GV_Shira |
F1i_Xie | p01Rrbs_Smith | E16p5_Seis | Rrbs_GuoF | |
FcF6wNeun_Lis | p02Rrbs_Smith | Rrbs_Shen | ||
FcM7wNeun_Lis | p032Rrbs_Smith | |||
Rrbs_Meis | P0_Ficz | |||
Rrbs_Smith | Wt_Stad | |||
Wt_GuoJU | Wt_Li |
26 human methylomes and 25 murine methylomes were collected. Cell types include brain neurons (Brain), embryonic stem cell (ESC), induced pluripotent stem cell (iPSC), female PGC (FPGC), male PGC (MPGC), and oocyte. The iPS cell lines are marked with asterisk. Samples in RRBS libraries are marked in italic. In the main text, samples are named with a prefix using their cell types, such as hBrain_FCN_Zill for the human brain neuron sample FCN_Zill.