Table 1.
Template proteins used for building the target proteins in 2013 Phase 1 exercise.
| Target ID | High Sequence Identity Template a) | Low Sequence Identity Template b) | ||
|---|---|---|---|---|
| PDB ID a) | Sequence Identity (%) | PDB ID | Sequence Identity (%) | |
| DIG1 | 1GY7B | 86.9 | 1ZO2A | 39.3 |
| DIG2 | 1MVEA | 89.9 | 1CPNA | 27.5 |
| DIG3 | 1YNAA | 81.3 | 3AKQA | 54.7 |
| DIG4 | 3JUMB | 87.9 | 3FF0A | 48.3 |
| DIG5 | 1Z1SA | 91.5 | 1S5AA | 36.1 |
| DIG6 | 3CU3A | 80.0 | 4I4KA | 25.2 |
| DIG7 | 3GWRB | 86.2 | 3CNXA | 24.2 |
| DIG8 | 3HK4A | 78.1 | 5AIGA | 23.9 |
| DIG9 | 1I60A | 88.2 | 2ZVRA | 22.1 |
| DIG10 | 1Z1SA | 92.2 | 1S5AA | 35.3 |
| DIG12 | 2OWPA | 88.8 | 2RCDA | 46.5 |
| DIG13 | 2OX1A | 90.8 | 4CNNA | 19.6 |
| DIG14 | 3E5ZA | 92.0 | 3DR2A | 28.3 |
| DIG17 | 3CU3A | 85.0 | 4I4KA | 24.6 |
| DIG18 | 1Z1SA | 89.9 | 1S5AA | 35.3 |
| DIG19 | 1Z1SA | 86.0 | 1S5AA | 33.6 |
a)
Templates with a high sequence identity to the target proteins.
b)
Templates with a low sequence identity to the targets. The models were used in the post-analyses to investigate how the quality of homology models affects to the predicting ligand-binding proteins.