Table 1.
Genes responding differently to oAβ in SH versus EE mice at 24 and 48 h that belong to either cytokine signaling pathways or the JNK signaling pathwaya
| Gene | Response to oAβ (7PA2:CHO− mRNA ratio) |
|||||
|---|---|---|---|---|---|---|
| SH 24 h | SH 48 h | EE 24 h | EE 48 h | p(SH vs EE) 24 h | p(SH vs EE) 48 h | |
| Ccl2 | 1.32 ± 0.04 | — | 1.00 ± 0.04 | — | <0.001 | — |
| Ccl3b | 1.21 ± 0.03 | 1.73 ± 0.14 | 0.94 ± 0.03 | 0.89 ± 0.01 | <0.001 | <0.001 |
| Ccl4b | 1.29 ± 0.01* | 1.68 ± 0.22 | 0.90 ± 0.03 | 1.02 ± 0.13 | <0.0001 | <0.05 |
| Csf1 | — | 1.25 ± 0.08 | — | 0.82 ± 0.04 | — | <0.01 |
| IL-1β | — | 1.58 ± 0.31 | — | 0.92 ± 0.22 | — | <0.05 |
| IL-6 | 1.65 ± 0.11 | — | 0.70 ± 0.17 | — | <0.01 | — |
| Mef2a | 1.20 ± 0.07 | — | 0.86 ± 0.08 | — | <0.01 | — |
| Ptger3 | — | 0.74 ± 0.07 | — | 1.12 ± 0.04 | — | <0.01 |
| Rhoa | 1.07 ± 0.02 | — | 1.01 ± 0.01 | — | — | <0.05 |
| Tgfb1 | — | 0.85 ± 0.05 | — | 1.02 ± 0.05 | — | <0.05 |
| Tnfb | 1.20 ± 0.05 | 1.25 ± 0.02* | 0.86 ± 0.00 | 0.94 ± 0.08 | <0.001 | <0.01 |
| Fos | — | 1.40 ± 0.12 | — | 1.18 ± 0.05 | — | <0.05 |
| Jun | 1.12 ± 0.03 | 1.15 ± 0.10 | 0.97 ± 0.02 | 1.29 ± 0.02** | <0.01 | — |
| Myc | 1.43 ± 0.11 | — | 0.87 ± 0.02** | — | <0.001 | — |
aAll genes in table are selected based on significant response to oAβ in SH mice without correction.
bGene selected for further analysis.
*Significance with correction.
**Significance without correction.