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. 2016 Sep 1;11(9):e0161756. doi: 10.1371/journal.pone.0161756

Table 2. List of sequences of primers and PNA probes used in real-time PCR.

Gene Mutation Direct-ion Primer PNA Probe
Primer Sequence (5' - 3') Size (bp) Probe Sequence (5' - 3') Fluo-resce-nce
GJB2 p.V37I F GGGGTGTGAACAAACACTCCA 161 CCACAACGAGGATC FAM
R ATCTCCCCACACCTCCTTTGC
c.235delC F ACGATCACTACTTCCCCATCTCC 145 CAGGGCCCATAGCCG Cy5
c.299delAT R CTCTTTATCTCCCCCTTGATGAAC CATGTCTCCGGTA HEX
p.R143W F GGTGGACCTACACAAGCAGCA 90 GATGACCCGGAAGAA Texas Red
R TGGAGAAGCCGTCGTACATGA
SLC16A4 p.T410M F TTTGGGATCAGCAACATCTTCTC 154 TCCCGCACGGCCGTC FAM
R CCATTCCTCGACTTGTTCTCTGA CCGCATGG FAM
p.L676Q F CAATCCATAGCCTTGTGCTTGAC 151 AGATCACTGCGGG HEX
R TTGCAATACTGGACAACCCACAT
p.H723R F AGCCTGGGCAATAGAATGAGACT 229 GGTCCATGATGCTA Texas Red
R AAATGGAACCTTGACCCTCTTGA
c.IVS7-2A>G F CACAAAATCCCAGTCCCTATTCC 221 TTTTATTTCAGACGATAA Cy5
R CCCTTGGGATGGATTTAACAATG
MTRNR1 1555A>G F GGTCGAAGGTGGATTTAGCAG 202 ACGACTTGTCTCCTCTA HEX
R GCTACACTCTGGTTCGTCCAA
TMPRSS3 p.A306T F ATTTCAGCTTGTACCTCCCCAAG 189 ATGACATCGCCCTTATG Cy5
R ACCCAGATGTACCATTGAACGTG
CDH23 p.P240L F ACTTGGCCATCATCATCACAGAT 162 AACCTGCCTTACAGC Texas Red
R CCCTAACAGGAGCTCAGAAGGAA

F: forward direction, R: reverse direction