Table 3. Functional annotation of M. indica var.
| Down- regulated | |||
|---|---|---|---|
| Term | Annotated | P-value | |
| Biological Processes | GO:0010200 | response to chitin | 4.40E-10 |
| GO:0009753 | Response to jasmonic acid | 1.10E-09 | |
| GO:0009651 | Response to salt stress | 6.60E-08 | |
| GO:0009414 | Response to water deprivation | 1.10E-08 | |
| GO:009611 | Response to wounding | 2.70E-08 | |
| GO:0046686 | Response to cadmium ion | 4.30E-08 | |
| GO:0042742 | Defense response to bacterium | 2.00E-07 | |
| GO:0080167 | Response to karrikin | 8.30E-07 | |
| GO:0006857 | Oligopetide transport | 1.80E-06 | |
| Molecular functions | GO:0009409 | Response to cold | 4.10E-06 |
| GO:0016168 | Chlorophyll binding | 8.70E-07 | |
| GO:0004590 | Orotidine-5′-phosphate decarboxylate activity | 1.40E-05 | |
| GO:0043295 | Glutathione binding | 2.60E-05 | |
| GO:0020037 | Heme binding | 5.80E-05 | |
| GO:0005507 | Copper ion binding | 0.00013 | |
| GO:0004096 | Catalase activity | 0.00032 | |
| GO:0030599 | Pectinesteraseactivity | 0.00035 | |
| GO:0015035 | Protein disulphide oxidoreductase activity | 0.00052 | |
| GO:0008810 | Cellulase activity | 0.00068 | |
| Up-regulated | |||
| Biological Processes | Term | Annotated | P-value |
| GO:0045490 | Pectin catabolic process | 5.00E-09 | |
| GO:0006885 | Regulation of pH | 2.40E-06 | |
| GO:0009664 | Plant type cell wall organization | 2.70E-06 | |
| GO:0006754 | ATP biosynthetic process | 6.70E-06 | |
| GO:0055085 | Transmembrane transport | 7.90E-06 | |
| GO:0006562 | Proline catabolic process | 0.00031 | |
| GO:0006788 | Heme oxidation | 0.00031 | |
| GO:0009415 | Response to water | 0.00031 | |
| GO:0006557 | S-adenosylmethioninamine biosynthesis | 0.0006 | |
| GO:0006470 | Protein dephosphorylation | 0.00069 | |
| Molecular functions | GO:0030570 | Pectate lyase activity | 1.60E-11 |
| GO:0022891 | Substrate specific transmembrane transport activity | 2.50E-06 | |
| GO:0015385 | Sodium:proton antiporter activity | 2.30E-05 | |
| GO:0003700 | Sequence specific DNA binding transcription factor | 3.70E-05 | |
| GO:0034450 | Ubiquitin-ubiquitin ligase activity | 4.80E-05 | |
| GO:0004176 | ATP-dependent peptidase activity | 5.20E-05 | |
| GO:0004722 | Protein serine/threonine phosphatase activity | 6.00E-05 | |
| GO:0005215 | Transporter activity | 7.00E-05 | |
| GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.00E-04 | |
| GO:0004657 | Proline dehydrogenase activity | 1.00E-04 | |
“Dashehari” transcripts: Up and down regulated GOSlim terms in M. indica transcripts under biological process (BP) and molecular function categories (MF).