Matos et al. (T2) |
NER (Gene/protein) + normalization |
BioCreative II Gene Mention Recognition corpus |
http://www.biocreative.org/resources/corpora |
NER (Species/organism) + normalization |
LINNAEUS |
http://linnaeus.sourceforge.net/ |
Batista-Navarro et al. (T3) |
NER (Gene/protein) + normalization |
CHEMDNER GPRO |
http://www.biocreative.org/resources/corpora/chemdner-patents-gpro-corpus/ |
NER (Species/organism) + normalization |
S800 |
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.006539 |
Singh et al. (T4) |
NER (Gene/protein) + normalization |
BioCreative II Gene Mention Recognition corpus |
http://www.biocreative.org/resources/corpora |
NER (Species/organism) + normalization |
S800 |
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0065390 |
NER (Gene/protein/species) evaluation |
IGN corpus |
https://sites.google.com/site/hongjiedai/projects/the-ign-corpus |
Peng et al. (T6) |
PPI passages |
20 in-house full text documents |
http://proteininformationresource.org/iprolink/corpora |
AIMed corpus |
ftp://ftp.cs.utexas.edu/pub/mooney/bio-data |
Aydin et al. (T7) |
PPI experimental method passages |
In-house developed corpus |
|
Kim and Wilbur (T8) |
PPI passages |
BioCreative PPI corpus |
http://www.biocreative.org/resources/corpora |
Two in-house developed corpora |
|
Islamaj Dogan et al. (T8) |
GI passages |
Two in-house developed corpora |
http://bioc.sourceforge.net |