Skip to main content
. 2016 Sep 2;11(9):e0162324. doi: 10.1371/journal.pone.0162324

Fig 3. Heterogenous sequence divergence of the five Actinidiaceae chloroplast genomes.

Fig 3

(A) VISTA-based identity plots of Actinidiaceae chloroplast genomes with A. chinensis used as a reference. Thick arrowed black lines show the inverted repeat regions (IRs) in the chloroplast genome. All the chloroplast genome regions are color coded as protein coding, rRNA, tRNA or conserved non-coding sequences (CNS). (B) Varied sequence divergence among the LSC, SSC and IRs (in terms of IRa), as well as the coding and non-coding regions. The percentage of nucleotide substitutions (SNPs) for each region was estimated respectively.