Table 2.

Enriched Gene Ontology (GO) terms for the genes associated with most CNEs based on the CNEs-union set

GO-ID	Term	Category	FDR
GO:0048468	Cell development	P	1.46E-63
GO:0048869	Cellular developmental process	P	2.86E-56
GO:0030154	Cell differentiation	P	2.16E-54
GO:0022008	Neurogenesis	P	2.49E-51
GO:0048699	Generation of neurons	P	1.95E-49
GO:0030182	Neuron differentiation	P	1.86E-46
GO:0007399	Nervous system development	P	9.71E-46
GO:0009653	Anatomical structure morphogenesis	P	1.01E-45
GO:0048856	Anatomical structure development	P	1.99E-40
GO:0030030	Cell projection organization	P	2.00E-39

Note.—The highlighted GO terms are shown as top 10 enriched GO terms based on all of our four CNE sets. For the GO term category column, “C” stands for cellular component, “F” for biological function, and “P” biological process. The statistical significance was assessed by Fisher’s exact test with FDR correction.