Table 1. Sequences of oligonucleotides used for RT-PCR, RT-qPCR, cloning and mutagenesis.
| genes | sequence (5′-3′) |
Product size (bp) | Accession n° | |
|---|---|---|---|---|
| Forward | reverse | |||
| human LOX | GATACGGCACTGGCTACTTCC | CTGGCCAGACAGTTTTCCTCC | 136 | NM_002317.5 |
| human LOXL1 | AGCATCCACTTATGTGCAGAGA | GAGGAAGTCTGCTGTGCCCT | 166 | NM_005576.2 |
| human LOXL2 | CACTGCGGATCCCTGAAACC | CTGTCTTCGGGCTGATGATCC | 103 | NM_002318.2 |
| human LOXL3 | CAGGCTGCCCACATCCTCTG | ATCCTCATCGTGCGTACAGTC | 189 | NM_032603.3 |
| human LOXL4 | Commercial (QIAGEN) | 146 | NM_032211.6 | |
| human RARα | AGTCCTCAGGCTACCACTAT | CCTCCTTCTTCTTCTTGTTT | 225 | NM_000964.3 |
| human RARβ | ATGGATGTTCTGTCAGTGAG | CATAGTGGTACCCTGATGAT | 268 | NM_000965.4 |
| human RARγ | ACCAATAAGGAGCGACTCT | ATCTCCTCTGAGCTGGTG | 212 | NM_000966.5 |
| human RXRα | GGATCCCACACTTCTCAG | GAGTCAGGGTTAAAGAGGAC | 286 | NM_002957.5 |
| human RXRβ | AGTACTGCCGCTATCAGAA | GTTAGTCACAGGGTCATTTG | 242 | NM_001270401.1 |
| human RXRγ | CTACACAGATACCCCAGTGA | GGGTAGTTCATGTTTCCAAT | 249 | NM_006917.4 |
| human RPLP0 | AGGCTTTAGGTATCACCACT | GCAGAGTTTCCTCTGTGATA | 219 | NM_001002.3 |
| mouse LOX | CATAGATCGCATGGTGGGCG | ACTACATCCAGGCTTCCACGTA | 195 | NM_010728.3 |
| mouse LOXL1 | CGTGCTGGAGCCACCTTACT | TCCTTGCGATGCGCAGCAGA | 219 | NM_010729.3 |
| mouse LOXL2 | GCACACTGAAGACGTTGGAGT | AAGGCTTGGAAGCAGATCTGC | 208 | NM_033325.2 |
| mouse LOXL3 | GATGATGACTTCACGCTGCAG | GTGACTGTACCCATGATGAGG | 205 | NM_013586.4 |
| mouse LOXL4 | CCAAGTATGGTCAAGGAGAGG | AAGGTCTCCAATGCCCTCGG | 193 | NM_001164311.1 |
| mouse RARα | CACCTCAATGGGTACCCAGTA | AAGCAAGGCTTGTAGATGCGG | 224 | NM_009024.2 |
| mouse RARβ | CTCGTCCCGAGCCCACCATCTCCACTT | GAGGTCGTCTAGCTCCGCTGTCATCTC | 351 | NM_001289761.1 |
| mouse RARγ | CTCATCACCAAGGTCAGCAAAGCC | CAGCCCATCCGAGAATGTCATAGT | 312 | NM_011244.4 |
| mouse RPLP0 | CAGGCTTTAGGCATCACCACT | GGGGGAGATGTTCAGCATGTT | 132 | NM_007475.5 |
| human LOXL4 promoter DR5-1 | GAGAGGTACCTCAGCATGAGAGGTGGCTGG | GAGAGCTAGCGGAGGCAGATGTGCAAGTAAG | 351 | |
| human LOXL4 promoter DR5-2 | GAGAGGTACCCCGTGGCCCTTGTCAATTAC | GAGAGCTAGCTCACAACTTTCCACTCCTCGG | 379 | |
| human LOXL4 promoter mutant DR5-1 | GGTGGGGCAGTATAACTGGGGGGA | TCCCCCCAGTTATACTGCCCCACC | ||
| human LOXL4 promoter mutant DR5-2 | CCCAGGCATGTATAAGCCACAGGA | TCCTGTGGCTTATACATGCCTGGG | ||