Table 2.
Transposases and strain-specific genes deduced by pairwise genome comparison in rhizobial strains
| Transposases (Tn/Mb) a | CCGM1 | CIAT652 | CCGM7 | CFNEI73 |
|---|---|---|---|---|
| Genome | 67 (9.7) | 86 (13.3) | 85 (12.4) | 96 (14.2) |
| By type of replicon: | ||||
| Chromosome | 11 (2.5) | 37 (8.2) | 15 (4.1) | 29 (7.7) |
| Plasmids | 56 (23.4) | 49 (25.3) | 70 (21.9) | 67 (22.4) |
| Homologsb | 5402 (84.0) | 5202 (84.6) | 5783 (87.6) | 5721 (88.5) |
| Strain-specific genesc | 604 (9.4) | 668 (10.9) | 373 (5.7) | 364 (5.6) |
| By type of replicond: | ||||
| Chromosome | 282 (6.6) | 420 (9.7) | 47 (1.3) | 96 (2.6) |
| Plasmids | 322 (14.7) | 248 (14.5) | 326 (10.7) | 268 (9.6) |
aInclude integrases
b% of genome in parenthesis
cThe rest of genes corresponded to short genes (<300 nt) which were discarded, by strain: CCGM1, 422; CIAT652, 279; CCGM7, 445; CFNEI73, 381
d% of replicon(s)