Table 2.
mtDNA-I-mtDNA-II | Pseudo-functional | ||||||
---|---|---|---|---|---|---|---|
Pseudogene | Functional gene start nta | Pseudogene lengthb | Functional gene spanb | % identityc | % gapsd | % identityc | % gapsd |
p-cox1-a | 790 | 114 | 113 | 100 | 0 | 81 | 1 |
p-cox1-b | 1 | 597 | 723 | 99 | 0 | 63 | 18 |
p-cox1-c | 874 | 93 | 93 | 99 | 0 | 91,90e | 0 |
p-cox2 | 44 | 121,145e | 169 | 100 | 17 | 98 | 28,14e |
p-nad4 | 752 | 92 | 93 | 99 | 0 | 80 | 1 |
p-nad5 | 742 | 366 | 369 | - | - | 89 | 2 |
aThe position given is the nucleotide of the functional gene at which the pseudogene sequence begins. bDue to gaps in the sequences, the length of the pseudogenes and the span of the functional gene with which they align are both listed. cPercent sequence identities are for non-gapped aligned sequence. dPercent gaps are for the entire length of the alignment. eWhere two values are separated by a comma, the first value is for mtDNA-I and the second for mtDNA-II