Table 1. P-values of enrichment tests of increasing numbers of most significant SNPs for each HopAM1-induced cell death QTL.
Number of top SNPS | 10 | 50 | 100 | 500 | 1000 | 10000 |
---|---|---|---|---|---|---|
QTL1 | 0.489 | 0.995 | 0.579 | 0.643 | 0.909 | 1 |
QTL2 | 0.818 | 1 | 1 | 1 | 1 | 1 |
QTL4 | 0.0906 | 0.0278 | 3.10 × 10−13 | 2.88 × 10−46 | 2.14 × 10−66 | 1.52 × 10−08 |
QTL5A | 0.537 | 0.0434 | 1.55 × 10−06 | 0.00942 | 0.0088 | 3.73 × 10−07 |
QTL5B | 1 | 1 | 1 | 7.04 × 10−06 | 0.00021 | 0.00021 |
Calculated using a Fisher’s exact test with a two-by-two test table design.