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. 2016 Jul 11;204(1):77–87. doi: 10.1534/genetics.116.190462

Table 2. Summary of notation and definitions.

Notation Definition
K No. of mutants
D Total no. of reads per sampling time point (sequencing depth)
ci Initial population size of mutant i
ri (Exponential) growth rate of mutant i
Ni(t) No. of mutants of type i at time t
n(t)=(n1(t),n2(t),,nK(t)) Vector of the observed no. of sequencing reads sampled at time t
pi(t) Relative frequency of mutant i at time t
τ No. of samples taken
tτ Duration of the experiment
T No. of sampling time points (τ=T,tτ=T1)
si=rir1 Selection coefficient of mutant i