Table I. Statistics of the transcripts, proteins and HLA peptides identifications.
Analysis type | Number of identifications | Number of upregulations | Number of down regulations | Number of identified TAs | Number of upregulated TAs | Number of upregulated CTAs |
---|---|---|---|---|---|---|
HLA Peptidome | 25544 | 1855 | 824 | 731 | 72 | 21 |
(Source proteins) | (7817) | (1539) | (729) | (160) | (54) | (15) |
Proteome | 7555 | 1759 | 1602 | 141 | 45 | 14 |
Transcriptome | 26055 | 3892 | 643 | 313 | 109 | 42 |