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. 2015 Dec 23;1(1):vev021. doi: 10.1093/ve/vev021

Table 1.

Pearson correlation data between pairs of the sets of RFN values for BMV RNA recombinants identified in different hosts.a

BMV RNA Host pairs Pearson correlation coefficient P Degrees of freedom
RNA1 Barley/C. quinoa −0.1522136 0.6034 12
RNA1 Barley/N. benthamiana −0.09031762 0.7588 12
RNA1 N. benthamiana/C. quinoa 0.0468351 0.8129 26
RNA2 Barley/C. quinoa −0.2099357 0.2933 25
RNA2 Barley/N. benthamiana 0.1600686 0.4251 25
RNA2 Barley/protoplasts 1:1 0.4365035 0.02282 25
RNA2 Barley/protoplasts 3:1 −0.01613249 0.9363 25
RNA2 N. benthamiana/C. quinoa 0.3810301 0.009814 43
RNA2 N. benthamiana/protoplasts 1:1 0.6522988 1.21E-06 43
RNA2 N. benthamiana/protoplasts 3:1 0.08308495 0.5874 43
RNA2 C. quinoa/protoplasts 1:1 0.07462209 0.6261 43
RNA2 C. quinoa/protoplasts 3:1 0.1884978 0.215 43
RNA2 Protoplasts1:1/protoplasts 3:1 0.1785824 0.2405 43
RNA3 Barley/protoplasts 1:1 0.5198842 0.039 14
RNA3 Barley/protoplasts 1:3 0.5799374 0.01853 14
RNA3 Barley/protoplasts 3:1 0.01146229 0.9664 14
RNA3 Protoplasts 1:1/protoplasts 1:3 0.6443845 0.00705 14
RNA3 Protoplasts 1:1/protoplasts 3:1 −0.2542184 0.342 14
RNA3 Protoplasts 1:3/protoplasts 3:1 −0.1720674 0.524 14

aColumn 2 shows the host pair that was compared and analyzed for both the linear similarity at recombination sites and the frequency at given BMV RNA segment (indicated in column 1). Column 3 shows the calculated Pearson correlation coefficient for each respective pair of hosts. A coefficient of 0.5 and higher suggests a high similarity in recombination profiles in the given pair of hosts. Column four presents the corresponding P values that reflect the reliability of the Pearson correlation coefficient. A P value of 0.05 and lower means a 95 per cent chance the stated correlation being correct. The fifth column displays the degrees of freedom, which was used to calculate the correlations; they simply represent the number of fragments being analyzed minus 2.