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. Author manuscript; available in PMC: 2016 Sep 7.
Published in final edited form as: Methods. 2014 Jun 27;69(3):315–325. doi: 10.1016/j.ymeth.2014.06.003

Table 5.

The pairwise comparisons correlated to each other. Fold changes of two pairwise comparisons were used to calculate a correlation coefficient. This table listed pairs of the comparisons from different data sets or species having the strongest correlation to each other.

Comparison1 Dataset1 Species1 Comparison2 Dataset2 Species2 Na Corrb
50nM Rotenone, 1 week GSE35642 human Mito patients muscle GSE42986 human 11472 −0.42
5nM Rotenone, 4 weeks GSE35642 human Mito patients muscle GSE42986 human 11472 0.39
Patients with CoQ10 def. GSE33940 human Mito patients muscle GSE42986 human 17453 0.37
Sirt3 KO, standard diet GSE30552 mouse Mito patients muscle GSE42986 human 16139 −0.37
Sirt3 KO, standard diet GSE30552 mouse Probucol treatment GSE18677 mouse 16692 −0.35
Patients of 4977bp del GSE1462 human Mito patients muscle GSE42986 human 11472 0.34
PGC1b KO in liver GSE6210 mouse Rotenone, 1 day old GSE46051 worm 3153 0.32
PGC1a overexpression GSE4330 mouse PGC1a KO, standard diet GSE34773 mouse 12941 −0.30
a

Number of homolog gene clusters included by both comparisons;

b

Pearson’s correlation coefficient between 2 sets of fold changes.