Table 1. Genome sizes, 454 pyrosequencing, and repetitive element clustering.
Species | Sexual System | Picograms/Nucleus (Mean ± SD) | 1C Value | Raw Reads | Filtered Reads | Clustered Reads (%) |
---|---|---|---|---|---|---|
A. officinalis | Dioecious | 2.74 ± 0.044 | 1.37 | 29,677 | 26,525 | 54.4% |
A. maritimus | Dioecious | 7.87 ± 0.204a | 1.31 | 49,616 | 45,036 | 53.7% |
A. aphyllus | Dioecious | 2.49 ± 0.007 | 1.25 | 47,322 | 42,808 | 58.9% |
A. stipularis | Dioecious | 2.17 ± 0.005 | 1.09 | 30,405 | 27,911 | 56.4% |
A. falcatus | Hermaphrodite | 2.11 ± 0.007 | 1.06 | 26,836 | 24,304 | 60.4% |
A. virgatus | Hermaphrodite | 1.66 ± 0.055 | 0.83 | 45,043 | 41,053 | 45.0% |
A. pyrimidalis | Hermaphrodite | 1.44 ± 0.037a | 0.72 | 56,197 | 51,293 | 53.8% |
A. asparagoides | Hermaphrodite | 4.80 ± 0.062 | 2.40 | 41,952 | 37,435 | 59.2% |
Sum | 247,755 | 224,804 | ||||
Average | 41,293 | 37,467 |
Data from Štajner et al. (2002).