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. Author manuscript; available in PMC: 2017 May 22.
Published in final edited form as: J Mol Biol. 2016 Apr 20;428(10 Pt B):2228–2236. doi: 10.1016/j.jmb.2016.04.018

Table 1.

Rates of [35S]-fMet release mediated by E. coli RF1 and RF2 from E. coli 70S ribosomes programmed with canonical or pseudouridylated stop codons.

Stop codon
UAA UAG ΨAA ΨAG AAA no mRNA

kobs, s−1
10 nM RF1 0.031 ± 0.004 0.039 ± 0.005 0.032 ± 0.005 0.028 ± 0.004 (1.7 ± 0.2) ·10−5 (9.1 ± 1.0)·10−6
30 nM RF1 0.045 ± 0.004 not measured 0.044 ± 0.005 not measured (2.8 ± 0.3)·10−5 (1.7 ± 0.3)·10−5
100 nM RF1 0.058 ± 0.008 0.046 ± 0.005 0.052 ± 0.006 0.048 ± 0.005 (7.9 ± 0.6)·10−5 (2.5 ± 0.2)·10−5
500 nM RF1 0.055 ± 0.006 0.059 ± 0.006 0.066 ± 0.008 0.059 ± 0.006 (1.8 ± 0.1)·10−4 (4.2 ± 0.1)·10−5
10 nM RF2 (5.5 ± 0.8)·10−4 not measured (5.7 ± 1.0)·10−4 not measured not measured not measured
25 nM RF2 (4.9 ± 1.0)·10−4 not measured (5.9 ± 0.7)·10−4 not measured not measured not measured
2 μM RF2 (4.3 ± 0.3)·10−4 not measured (5.4 ± 0.4)·10−4 not measured (1.2 ± 0.2)·10−5 (6.0 ± 1.9)·10−6

T. th. 70S + 500 nM E. coli RF1 0.023 ± 0.002 not measured 0.020 ± 0.003 not measured not measured not measured