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. 2016 Aug 9;16(8):1259. doi: 10.3390/s16081259

Table 1.

Detection sensitivity of MS-UC-FRET, RQ-PCR and pyrosequencing for CDKN2A methylation (number of replicates with CDKN2A methylation detected).

Methylation% 0 0.01 0.05 0.1 1 5 10 20 50 100
No. positive/No. tested
UC-MS-FRET NEG 4/10 2/10 10/10 10/10 10/10 10/10 10/10 10/10 10/10
RQ-PCR 0/4 0/4 0/4 0/4 0/4 4/4 4/4 4/4 4/4 4/4
pyrosequencing NEG ND ND ND ND 2/2 2/2 2/2 2/2 ND

Abbreviations: NEG: negative; ND: not done.