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. 2016 Sep 6;111(5):963–972. doi: 10.1016/j.bpj.2016.04.055

Table 2.

Summary of Residues Located within Typical Hydrogen-Bonding Distance with Ordered Waters in the Extracellular Domain for Both WT ASR and D217E ASR

Residue (H-Bond Distance (Å)) WT Water Water RMSD (Å) Residue (H-Bond Distance (Å)) D217E
ATR Schiff base (2.57), Tyr51 (2.92), Asp75 (2.74), Trp76 (2.94) 402 0.22 ATR Schiff base (3.13), Tyr51 (2.99), Asp75 (2.91), Trp76 (2.88)
Arg72 NH1 (3.14) 403 0.91 His8 (2.74), Arg72 NH1 (2.74)
Arg72 (3.14), Tyr73 (3.18), Wat405 (2.96) 404 0.87 Arg72 (2.67), Tyr73 (3.02), Wat405 (2.50)
Ser188 (2.81), Wat406 (2.81) 405 0.49 Ser188 (2.71), Wat406 (2.88)
Trp183 C = O (2.79), Ser188 NH (2.96), Asp198 (3.16) 406 0.15 Trp183 C = O (2.72), Ser188 NH (2.98), Asp198 (3.10)
Ala68 C = O (2.96), Asp120 (2.59) 407 0.43 Ala68 C = O (2.96), Asp120 (2.48)
Arg72 NH2 (2.98), Gln195 (2.58), Asp198 (2.56) 408 1.72 Arg72 NH1 (3.14), Arg72 NH2 (3.06), Gln195 (2.32), Asp198 (2.25)

The RMSD of corresponding waters was calculated after superposition with the program Coot (49, 53).