Table 1.

Numbers of reads in the reference genome.

Sample	E	H	O
Valid reads	46,413,284	45,043,398	39,935,156
Mapped reads	32,068,726 (69.09%)	29,911,216 (66.41%)	27,147,943 (67.98%)
Unique mapped reads	31,520,409 (67.91%)	29,386,695 (65.24%)	26,670,680 (66.78%)
Multimapped reads	548,317 (1.18%)	524,521 (1.16%)	477,263 (1.20%)
PE mapped reads	13,909,419 (29.97%)	13,120,894 (29.13%)	11,735,308 (29.39%)
Exon	98.27%	98.05%	97.78%