Table 1.

Performance of methods for 960 diseases against 15 948 genes

Method	Average AUC	Average AUPR	Average recall rate within the top 100 genes (%)
Random walk	0.780	0.053	18.1
Network propagation	0.790	0.055	19.2
Random walk on heterogeneous network	0.930	0.138	37.9
Know-GENE	0.967	0.405	65.0
Know-GENE without using mutual information	0.700	0.167	24.0
Know-GENE without using core gene	0.967	0.352	63.8