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. 2016 Aug 8;113(36):10115–10120. doi: 10.1073/pnas.1609997113

Table S2.

List of primers

Gene/position Forward Reverse
Primers for cloning
P. marinus Tbx4/5 TAYAARTTYGCNGAYAAYAA CCYTTNGCRAANGGRTTRTTYTC
AARTTYGCNGAYAAYAARTGG RAANCCYTTNGCRAANGGRTT
CGCGGCTGGTACTTGTGCATCGAG
GCGAGTCGGGGTGCACGTAGAG
Primers for probe synthesis
L. erinacea Tbx5 GGGGAGGTTGTACGTTCACCCAGAT GGGCTGGTGAGAAACTGAGGTCTGA
L. erinacea Flt4 CGGGACTTCTGGACAATCTCACCGA TACTCCACGATCACCATCAGCGGAC
Danio rerio tbx5a (AF179407) CGGTAGACATCGTACAGGCCTCTCC ACGGCTTCTTATAGGGGTGTTCTCCTG
D. rerio flt4 (NM_130945) TGCAATGTCAAGCGAGTGAACCCAG CAATCTGGATGCCGGGGTATGGAGA
D. rerio tpma (NM_131105) CGCCTTGGACAGAGCAGAGCAG AGTGCGATGGAGAAAAGCGGCA
D. rerio fgf8a (NM_131281) TCCTTCACCTCTTTGCGTTT CACATCCTGTGCTTCGCTTA
D. rerio fgf10a (NM_182870) ACCAACTCCTCATCGTCTGC CAATGTCCGATTCCTCTCGT
D. rerio col2a1a (NM_131292) GGTGATCGTGGTGAGATTGGTGCAC CCTCTGTGTCCCTTCTGGCCTCTTT
P. marinus Tbx4/5 AARTTYGCNGAYAAYAARTGG CCYTTNGCRAANGGRTTRTTYTC
P. marinus Flt1/4 GACGAGCGAGGATGAAGGGGAGTAC CCACACCATTATCGGCCAGCAGAAC
 (ENSPMAT00000007382)
Primers for L. japonicum Tbx4/5 genome sequence
 Tbx4/5 Gap1 CGTGTCGCCTTCCTCCGCAGA TGGATGCGTGGGTGATTTCGTGGAT
 Tbx4/5 Gap2 CGCCTCCTCCGCTCTCCTTATCTGA ACCACGGGAAGAGAGAAAGAGACGC
 Tbx4/5 Gap3 TGCGGTCTGTGAACATCGTCACTGG AACATCTCCTAGCCACCGTGCTTGC
 Tbx4/5 Gap4 TGTGGGAGGAGAAATCGGAGGACCC TGCGGTAATTTCCAGAACTGCGGCT
 Tbx4/5 Gap5 GCAACTCACGACTACCCCACTTGCA GTGGTGACCGTGAGCAGGAATCGAG
 Tbx4/5 Gap6 GCAACTCACGACTACCCCACTTGCA GTGGTGACCGTGAGCAGGAATCGAG
 Tbx4/5 Gap7 GAGGGAGGGAGAGAGAGAGGGACAA CGTCACCGGTGTTGGCGGT
 Tbx4/5 Gap8 CTGCTGCCCATCACATCACCCGC GTGTAGGTGGTCGCGGGCACTTAAG
 Tbx4/5 Gap9 CCGTGACCTTTTACATCGTGCACCCAA CAACCGGGCAATGACACGATTCAGC
 Tbx4/5 Gap10 GTGCTCCTCCTGAACATCGCCCATT ACCTAGTTGCTGTACTGCCGTGCTG
Primers for genomic DNA fragment
 Mouse Tbx5 intron2 CTCCCAGCAAGTCTCCATCATCCCC AACTTCAGCCACAGTTCACGTTCATGA
 Mouse CNS12sh CCTCATCATCATTAGTCATGCTCGCT GCTGCTTCTGGAGACACTGGTC
 Gar Tbx5 intron2 TCTCCATCACCACAGACAACATACACTCA CCTCCCTGCCTTGGTTATAATCATCTCTGT
 Gar Tbx5 intron5 CGCGCGATTGAGGGTTAGAGTTGAA AGCGTCTGTTAAGTGATTTCAGATGGCAA
 Gar CNS11 AGTCGGCAGAGTCAGCTTCCATAGG GTGCTCACTACGCCTTCCATTTCGG
 Gar CNS12 GGCTGCTGTCTTAAATACCTTTCTTGGGC TGACGGGTGCTATTTGTCCTTTGCC
 Gar CNS12sh AAATCATCATTAGTCGTGGCTCATCGTG GCCTATCTTGATGTTAGTTTGACCCCTG
 Gar CNS23 TCTACAGGCACACACAACCCCTCTG CTGGACTCTGGACTCTGGACTGTGG
 Gar CNS26 CAGGGATGGAAGGCTTCAAACACTCA AGGAATTAAACCCAGGGCCCCAGAG
 Gar CNS27 AGGTTACCAGCTACAGTTGTCACACAGATG GGCGAGTTCATCCAGTTACACTCAGAAGG
 Gar CNS58 AGGCATCGATTCCTTCTCCGTGACG ATGTGGACTGCAGGGGTTGTGATGG
 Gar CNS59 GGGGAGGCTGTGTGGAAAACTGAGT CTTGTAGCACTGGGGCTCTGGGTTC
 Gar CNS63 TATAGCGCTCAGTCACGTGGCCTT TGCAAATCAACACTCAACGGTACAAGATGT
 Zebrafish tbx5a intron2 GTAACGTCAACTAGTGCCTCGATGGT CTTTTTAAAGAAGCATGCAGACAGAGAGTGAG
 Zebrafish CNS12sh GTGACCTTCTCGCTGTAAGATGATTGT ACACATCTTGATTTCATTAACATCTCTTCCTTCT
 Zebrafish CNS65 TGTTCCAGGGTCACAATAATGATGCTTTTAAGA CATGAAGGTTGCTCTGTGTTCTGCATGA
 SkateTbx5 intron2 CCAACAAACCACATTCCCCACAGCA TCCCGCTTTCGTAATGATCATCTCTGTCC
 Lamprey DNA fragment TCGATGCGTTCCTCAAAAGTGGCAC AGGATTAGGGCAGAGGGAGAGGGTG
Primers for tbx5a mutant genotype
 Zebrafish tbx5a exon8 AGTATTCCTGTGAGAACGGCGTTTCC
 Zebrafish tbx5a intron8 AGGTATCAGTGTGTGGTTTAGAGGCACA